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Population Genetics/Genomics

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IDTitleSection/TopicAuthorsKeywords
621A chromosome-scale Pedicularis genome enables exploring the determinants of genetic diversityPopulation Genetics/GenomicsJin, JianJun; Xu, Yuxing; McKenzie, Patrick; Meek, Jared; Li, De-zhu; Yi, Ting-Shuang; Ree, Richard; Eaton, Deren.Pedicularis
genome
Genetic diversity
Orobanchaceae
Lamiales
415A phylogeographic study of Grindelia ciliata using RADseq dataPopulation Genetics/GenomicsMoore, Abigail.Compositae
Phylogeography
Great Plains
drought
844
Canceled
Climatic and genetic determinants of biomass production and yield in the temperate model grass Brachypodium distachyon
Population Genetics/GenomicsKHODAVERDI, MASOUMEH Of.
540Convoluted complexes: role of hybridization and introgression in shaping plant species complexes in tropics (Hedychium spicatum Complex, Zingiberaceae)Population Genetics/GenomicsXavier, Aleena; Gowda, Vinita.Zingiberaceae
dd RAD
Asian tropics
Tropical Botany
780Detecting signals of polygenic adaptation in the face of demographic history and population structure in red spruce (Picea rubens)Population Genetics/GenomicsPrakash, Anoob; Keller, Stephen.diversifying selection
population genetics
quantitative genetics
Trees
QPC
601
Canceled
Determinants of mixed-ploidal variation and hybridization in big sagebrush (Artemisia tridentata) across the landscape
Population Genetics/GenomicsFaske, Trevor; Agneray, Alison; Richardson, Bryce; Leger, Elizabeth; Parchman, Thomas.landscape genomics
polyploidy
hybridization
918Development Impacts and Population Genetics of Serpentinite Associated Cirsium fontinale in California WetlandsPopulation Genetics/GenomicsKate, Stephanie; Cantley, Jason.population genetics
Wetland Species
restoration
Edaphic Endemism
GIS
178Does habitat variation drive floral and genetic divergence in Platanthera dilatata, with moderation by inter-population gene flow? Evidence from Southeast AlaskaPopulation Genetics/GenomicsWallace, Lisa; Bowles, Marlin.Orchidaceae
Microsatellites
Phenotypic variation
intraspecific variation
Genetic  variation
881Experimental validation of genetic offset predictions in the coniferous tree, red spruce (Picea rubens Sarg.)Population Genetics/GenomicsVerrico, Brittany; Capblancq, Thibaut; Keller, Stephen.Local adaptation
conifer
genotype-environment association
genetic offset
climate change
782Exploring conservation genetic methods for meta-collections of functionally extinct in the wild cycadsPopulation Genetics/GenomicsJones, Maia; Handley, Vanessa; Nagalingum, Nathalie.cycad
population genomics
conservation
ex situ living collection
1040Exploring evolutionary processes promoting adaptive divergence across populations of Hawaiian Chenopodium oahuense (Amaranthaceae)Population Genetics/GenomicsCantley, Jason; Bullock, Madison; Williams, Tanisha; Haase, Butch; Martine, Chris.hybridization
adaptation
population genetics
Hawaii
Incomplete Lineage Sorting
486From common gardens to candidate genes: exploring local adaptation to climate in red sprucePopulation Genetics/GenomicsCapblancq, Thibaut; Lachmuth, Susanne; Fitzpatrick, Matt; Keller, Stephen.Cliimate transfer distance
Genome scan
Exome
conifer
genotype-environment association
Local adaptation
Gradient Forest
RDA
275Genetic and epigenetic architecture of Pseudotaxus chienii yield novel insights into adaptive responses to heterogeneous environmentPopulation Genetics/GenomicsSu, Yingjuan; Lv, Zhuyan; Wang, Ting.Pseudotaxus chienii
(epi)genetic architecture
ecological adaptation
404Genetic diversity and the population structure in Clausena excavata (Rutaceae)Population Genetics/GenomicsYun, Narae; Lee, Yoonkyung; Paik, Jin-Hyub; Yi, Dong-Keun; Eum, Sang Mi; Choi, Sangho.Genetic diversity
SSR
Clausena excavata
population genetics
population biology
463Genetic diversity of European holly (Ilex aquifolium) in the German AlpsPopulation Genetics/GenomicsShigita, Gentaro; Ortiz, Edgardo M.; Gibis, Florian M.; Kastner, Toni; Hoewener, Alina; Ewald, Joerg; Schaefer, Hanno.Alps
Aquifoliaceae
biogeography
Genetic diversity
holly
Ilex
intraspecific variation
996Genetic diversity pattern reveals drivers of burcucumber (Sicyos angulatus L.) invasion in South KoreaPopulation Genetics/GenomicsLee, Soo-Rang; Son, Dong-Chan; Jo, Yeong-Seok.
276Genetic structure, local adaptation, and demographic history of Cephalotaxus oliveri based on population transcriptomic sequencingPopulation Genetics/GenomicsLiu, Hanjing; Su, Yingjuan; Wang, Ting. Cephalotaxus oliveri
Population transcriptome
Genetic differentiation
Local adaptation
Demographic history
Ecological niche model
416Genomics of polyploid adaptation and formation in Siberian Arabidopsis lyrataPopulation Genetics/GenomicsScott, Alison; Kolesnikova, Uliana; Novikova, Polina.polyploid
whole genome duplication
siberia
meiosis
arabidopsis
545Herbarium accessions for temporal studies of adaptation to climate in Arabidopsis thalianaPopulation Genetics/GenomicsLopez Perez, Lua; Lang, Patricia; Marciniak, Stephanie; Kistler, Logan; McKay, John; Burbano, Hernan; Perry, George; Lasky, Jesse.adaptation
genomics
herbaria
climate change
710Identification of variants in whole genome sequencing data of a Peruvian landrace of Capsicum chinense, arnaucho chile pepperPopulation Genetics/GenomicsEstrada, Richard; Saldaña, Carla L.; Salazar, Wilian; Contreras-Liza, Sergio; Guerrero-Abad, Juan C.; Vásquez, Héctor V.; Maicelo, Jorge L.; Arbizu, Carlos I..Solanaceae
NGS
genomics
DNA
germplasm
422Indigenous Knowledge Systems & Genomics: Insights from a collaboration aiming to understand how the Martu’s foraging practices aid in the distribution and diversity of a staple food source across the Western Australian desertPopulation Genetics/GenomicsWilliams, Tanisha; Heim, Jeffrey; McGuire, Chloe; Wrobleski, Amy; Bliege Bird, Rebecca; Martine, Chris.Solanum
Solanaceae
ethnobotany
Australia
Martu
Biodiversity
population genetics
Traditional Ecological Knowledge
902Johnsongrass jumping genes: Population-level variation in transposable element content and correlations with environmental characteristicsPopulation Genetics/GenomicsHofford, Nate; Motley, M'Kayla; MacNeill, Bryan; Deb, Sontosh; Adhikari, Bishnu; Busby, Andrew; McLaughlin, Susan; Oldham, Fae; McKain, Michael.transposable elements
invasive species
intraspecific variation
genome size variation
Johnsongrass
environmental variation
93Mapping genetic constraints of drought adaptation strategies in the eco-evolutionary model system, ArabidopsisPopulation Genetics/GenomicsRuffley, Megan; Leventhal, Laura; Exposito-Alonso, Moi.genetic constraint
adaptation
complex traits
drought
819Mating system and hybridization combine to effect range-wide genetic structure in a coastal endemic plantPopulation Genetics/GenomicsVan Natto, Alyson; Eckert, Chris.population genetics
Genetic variation
Genetic differentiation
Peripherality
Mating system
hybridization
61Minimal evidence for contemporary introgression in closely related sunflowers of WisconsinPopulation Genetics/GenomicsMitchell, Nora; Nguyen, Thu; Bylander, Michael Robert; McNabb, Lydia; Leonardson, Aleks.population genomics
introgression
sunflower
hybridization
209Origins of Amaranthus tuberculatus (Waterhemp) in Central Valley Agroecosystems: A Population Genetics Approach Using Genotyping-By-SequencingPopulation Genetics/GenomicsLopez, Alexander Joseph; Shrestha, Anil; Sosnoskie, Lynn; Waselkov, Katherine.
74Persistence of a rare orchid in the past, present and future: insights from phylogeography and species distribution modelingPopulation Genetics/GenomicsTrapnell, Dorset; Smallwood, Patrick; Dixon, Kingsley; Phillips, Ryan.
764Phylogenetic and population genomic analyses of the Claytonia arctica complex, based on targeted sequence capturePopulation Genetics/GenomicsGabbitas, Bob; Ickert-Bond, Steffi; Burleigh, J Gordon; Takebayashi, Naoki.Claytonia arctica complex
population genetics
GoFlag 408
103Pollinator loss causes rapid adaptive evolution of selfing and dramatically reduces genome-wide genetic variability Population Genetics/GenomicsBusch, Jeremiah; Bodbyl-Roels, Sarah; Tusuubira, Sharif; Kelly, John.adaptation
evolutionary potential
experimental evolution
genetic draft
1000Population genetics of the polymorphic flowering species Curcuma caulinaPopulation Genetics/GenomicsBhardhwaj, Krithjgnan S; Shrotri, Saket; Gowda, Vinita.
261Population Genetics of Two California Species of Checker Lily (Fritillaria)Population Genetics/GenomicsCARDENAS, ANDREW; Kaur, Arshnoor; Fajardo, Jacklyn; Waselkov, Katherine.Fritillaria
large genome
species delimitation
rare species
424Population genetic study of Calotropis procera (Aiton) W.T.Aiton. in Iran by using SCoT molecular markersPopulation Genetics/Genomicssheidaei, masoud; kordasti, mohammadreza; koohdar, fahimeeh.Genetic diversity
Calotropis procera
DAPC
LFMM
AMOVA
278
Canceled
Population genomics, Demographic history and Spatial Drivers of Genetic Structure in Sino-Japanese Populations of Meehania montis-koyae (Lamiaceae) using ddRAD-Seq data
Population Genetics/GenomicsTiamiyu, Bashir Bolaji; Zhang, Xu; Jose, Cerca; Zhang, Huajie; Wang, Hengchang; Deng, Tao.climate change
Genotype-environment association analysis
Local adaptation
Meehania montis-koyae
ddradseq
791Population genomics and local adaptation in three herbaceous perennials associated with longleaf pine savannaPopulation Genetics/GenomicsJoines, Jason Paul; Cooper, Elizabeth A; DeWalt, Saara J; Walker, Joan L.landscape genomics
population genomics
Local adaptation
longleaf pine
263Population Genomics of the Native and Invaded California Range of Palmer Amaranth (Amaranthus palmeri)Population Genetics/GenomicsDuque, Josue; Lopez, Alexander Joseph; Lum, Romy; Waselkov, Katherine.Palmer amaranth
STRUCTURE
population genomics
923
Canceled
Population genomics of the polyploid invasive aquatic fern Salvinia molesta in the Southeastern U.S
Population Genetics/GenomicsSutherland, Brittany.polyploidy
Plant invasion
adaptation
Salvinia
allopolyploidy
459Population genomics reveals convergent evolution and informs conservation in the Echinocereus fendleri group (Cactaceae)Population Genetics/GenomicsFehlberg, Shannon; Fehlberg, Kevin; Beck, James.Cactaceae
Echinocereus
conservation
ddradseq
convergent evolution
728Quantification of Genetic Diversity of Ohio’s Lakeside Daisy Using Amplified Fragment Length Polymorphism Molecular MarkersPopulation Genetics/GenomicsRoss, Gillian; Philpott, Megan.AFLP
Lakeside daisy
Genetic diversity
75Species-wide genomic resequencing in a model of mutualism in extreme environmentsPopulation Genetics/GenomicsYoder, Jeremy.coevolution
genome resequencing
Pollination
mutualism
landscape genomics
691The first draft genome assembly of the national tree of Peru, quina (Cinchona officinalis, Rubiaceae)Population Genetics/GenomicsSaldaña, Carla L.; Estrada, Richard; Salazar, Wilian; Guerrero-Abad, Juan C.; Vásquez, Héctor V.; Maicelo, Jorge L.; Arbizu, Carlos I..genome
Rubiaceae
NGS
DNA
183Tracing the Origin of Central California Amaranthus palmeri Populations and Identifying Possible Genes of AdaptationPopulation Genetics/GenomicsFajardo, Kristine; Duque, Josue; Waselkov, Katherine.agricultural weed
Amaranthaceae
Amaranthus palmeri
population genomics
invasive species
1021Understanding the population genetics of a rare and endangered plant species (Amsonia tharpii) across a fragmented landscapePopulation Genetics/GenomicsCohen, Dylan; Skogen, Krissa; Fant, Jeremie B; Doucet, Alissa; Young, Kyann.population genomics
rare species
ddradseq
habitat fragmentation
conservation
Amsonia tharpii
67Using Genomic Analysis to Assess Diversity and Clonal Propagation of the Florida Skullcap (Scutellaria floridana)Population Genetics/GenomicsHanko, Gina; Negron-Ortiz, Vivian; Moore, Rich.species conservation
genetics
175Using RAD capture sequences to investigate the origins of the American Amphitropical Disjuncts Larrea tridentata and Larrea divaricataPopulation Genetics/GenomicsLandis, Jacob; Gaynor, Michelle; Deanna, Rocío; O'Connor, Tim; Nguyen, Khoa; Ng, Julienne; Laport, Robert.long distance dispersal
polyploidy
new world deserts
adaptive radiation
Zygophyllaceae
RAD capture
689Using target capture data for population genetics: assessing allelic diversity within populations of three rare speciesPopulation Genetics/GenomicsGavin-Smyth, Nora; Fant, Jeremie B; Grinage, Ayress; Zhang, Johnathan.population genetics
Target Enrichment
Angiosperms353
Allele phasing
724White clover cyanogenesis: dual benefit or double-edged sword?Population Genetics/GenomicsKuo, Wenhsi.Trifolium
cyanogenesis
polymorphism
gene expression
Plant Defenses

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